Jonathan Brier (wolfgang8741)
Connected studies and activities

The Preference Project Circles Genevieve Genome Report Keeping Pace Cross-Genome Error Check GenomiX Genome Exploration GoViral (2014-2016) Quantified Flu GoViral Gut Instinct openSNP Twitter Archive Analyzer Personal Data Notebooks Imputer Fitbit Connection 23andMe Upload Genome/Exome Upload uBiome Upload American Gut Project Data sharing and ethical oversight Harvard Personal Genome Project Runkeeper connection Juno's Personal Data Exploratory Open Humans Online Forums GitHub Data Import Spotify integration Google Location History Upload Fitbit Intraday Google Fit UbiQomix Microbiome Exploration Mobility data of researchers Public Data Sharing
About me

I am a PhD Student in Information Studies at the University of Maryland focused on social computing topics in citizen science. Sharing participant information between researchers and with the public enables the possibility of collaboration and innovation in ways we have yet to imagine.

To help accelerate our understanding of our world, bodies, and show my commitment to open data I joined Open Humans. I hope that this data access is useful many times over. Together we can do great things.

Public data

23andMe Upload

23andMe-genotyping.txt
(15.0 MB) 23andMe full genotyping data, original format
23andMe-genotyping.vcf.bz2
(5.0 MB) 23andMe full genotyping data, VCF format

American Gut Project

American-Gut-SAMEA3687130-ena-info.json
(2.3 KB) American Gut sample accession data from the European Nucleotide Archive, JSON format.
American-Gut-SAMEA3687130-ena-info.tsv
(1.8 KB) American Gut sample accession data from the European Nucleotide Archive, TSV format.
American-Gut-SAMEA3687130-metadata.json
(17.1 KB) American Gut sample survey data and metadata, JSON format.
American-Gut-SAMEA3687130-metadata.tsv
(13.3 KB) American Gut sample survey data and metadata, TSV format.
American-Gut-SAMEA3687130-run-ERR1160762.fastq.gz
(11.6 MB) American Gut 16S FASTQ raw sequencing data.

Genome/Exome Upload

62a39d4bf0e844988aabeae5a612490d.vcf.gz
(551.9 MB) User-contributed VCF data
62a39d4bf0e844988aabeae5a612490d.vcf.metadata.json
(90.6 KB) VCF file metadata

GoViral

2017-02-09_589de3a535b86000048b731c.json
(542 bytes) survey_2017-02-09_589de3a535b86000048b731c.json
2017-03-01_58b6f026b20b96000474afa6.json
(517 bytes) survey_2017-03-01_58b6f026b20b96000474afa6.json
2017-03-06_58bed9340c195300076b4828.json
(517 bytes) survey_2017-03-06_58bed9340c195300076b4828.json
2017-03-27_58da88aed859d50007eaf583.json
(517 bytes) survey_2017-03-27_58da88aed859d50007eaf583.json
2017-04-03_58e3c3516f36850007dae5cb.json
(517 bytes) survey_2017-04-03_58e3c3516f36850007dae5cb.json
2017-04-10_58ecfdb391b02a00072db90c.json
(517 bytes) survey_2017-04-10_58ecfdb391b02a00072db90c.json
2017-04-17_58f6380f88e973000785e8ef.json
(517 bytes) survey_2017-04-17_58f6380f88e973000785e8ef.json
2017-04-27_5903672c2254e60007f1faa1.json
(525 bytes) survey_2017-04-27_5903672c2254e60007f1faa1.json
2017-05-01_5908adb030610200078044ab.json
(525 bytes) survey_2017-05-01_5908adb030610200078044ab.json
2017-05-08_5911e7c35be07100071f575a.json
(527 bytes) survey_2017-05-08_5911e7c35be07100071f575a.json
2017-05-15_591b2239c23a920007a62d0d.json
(517 bytes) survey_2017-05-15_591b2239c23a920007a62d0d.json
2017-05-22_59245cb97986720007621918.json
(517 bytes) survey_2017-05-22_59245cb97986720007621918.json
2017-05-30_592d97347d36bf0007c6c7cf.json
(517 bytes) survey_2017-05-30_592d97347d36bf0007c6c7cf.json

GoViral (2014-2016)

GoViral-sickness-data.json
(359 bytes) GoViral annual surveys, and sickness reports with viral lab test results (if available)

Harvard Personal Genome Project

PGP-Harvard-hu3E2659-surveys.json
(7.0 KB) PGP Harvard survey data, JSON format.

Imputer

member.imputed.vcf.bz2
(163.7 MB) Imputed genotypes from Imputer

openSNP

4801.json
(109 bytes) links to openSNP user 4801

uBiome Upload

taxonomy-1.json
(22.7 KB) uBiome 16S taxonomy data, JSON format.
taxonomy-2.json
(18.1 KB) uBiome 16S taxonomy data, JSON format.
uBiome-fastq-1.zip
(5.6 MB) uBiome 16S FASTQ raw sequencing data.
uBiome-fastq-2.zip
(28.4 MB) uBiome 16S FASTQ raw sequencing data.