Eric Uhden (ericjamesu)
Connected studies and activities

openSNP AncestryDNA Upload Harvard Personal Genome Project Data Selfies Genome/Exome Upload American Gut Project Moves connection Nokia Health (Withings) Connection GoViral (2014-2016) The Preference Project Circles Genevieve Genome Report Cross-Genome Error Check 23andMe Upload Wild Life of Our Homes Fitbit Connection GenomiX Genome Exploration Open Humans Healthkit Integration Open Pokemon GO GO GO! Nightscout Data Transfer Public Data Sharing

Public data

American Gut Project

American-Gut-SAMEA3607957-ena-info.json
(2.3 KB) American Gut sample accession data from the European Nucleotide Archive, JSON format.
American-Gut-SAMEA3607957-ena-info.tsv
(1.8 KB) American Gut sample accession data from the European Nucleotide Archive, TSV format.
American-Gut-SAMEA3607957-metadata.json
(15.3 KB) American Gut sample survey data and metadata, JSON format.
American-Gut-SAMEA3607957-metadata.tsv
(11.5 KB) American Gut sample survey data and metadata, TSV format.
American-Gut-SAMEA3607957-run-ERR1072992.fastq.gz
(1.7 MB) American Gut 16S FASTQ raw sequencing data.
American-Gut-SAMEA3608446-ena-info.json
(2.3 KB) American Gut sample accession data from the European Nucleotide Archive, JSON format.
American-Gut-SAMEA3608446-ena-info.tsv
(1.8 KB) American Gut sample accession data from the European Nucleotide Archive, TSV format.
American-Gut-SAMEA3608446-metadata.json
(15.3 KB) American Gut sample survey data and metadata, JSON format.
American-Gut-SAMEA3608446-metadata.tsv
(11.5 KB) American Gut sample survey data and metadata, TSV format.
American-Gut-SAMEA3608446-run-ERR1073514.fastq.gz
(1.9 MB) American Gut 16S FASTQ raw sequencing data.
American-Gut-SAMEA3608447-ena-info.json
(2.3 KB) American Gut sample accession data from the European Nucleotide Archive, JSON format.
American-Gut-SAMEA3608447-ena-info.tsv
(1.8 KB) American Gut sample accession data from the European Nucleotide Archive, TSV format.
American-Gut-SAMEA3608447-metadata.json
(15.3 KB) American Gut sample survey data and metadata, JSON format.
American-Gut-SAMEA3608447-metadata.tsv
(11.5 KB) American Gut sample survey data and metadata, TSV format.
American-Gut-SAMEA3608447-run-ERR1073515.fastq.gz
(2.7 MB) American Gut 16S FASTQ raw sequencing data.

Wild Life of Our Homes

bacteria-kit-1212-graphs.png
(472.1 KB) Visualization of Wild Life of Our Homes bacteria data
bacteria-kit-1212.csv.bz2
(609.2 KB) Bacteria 16S-based OTU counts and taxonomic classifications
fungi-kit-1212-graphs.png
(225.8 KB) Visualization of Wild Life of Our Homes fungi data
fungi-kit-1212.csv.bz2
(320.6 KB) Fungi ITS-based OTU counts and taxonomic classifications
home-data-kit-1212.json
(387 bytes) Geographical and architectural information about residence

Data Selfies

LH7161_report.final.pdf
(592.7 KB) Exome 23andme Report
Telome Telomere Report 2013.pdf
(1.9 MB) Telomere Length 2013

Genome/Exome Upload

LH7161.vcf.gz
(7.7 MB) User-contributed VCF data
LH7161.vcf.metadata.json
(8.4 KB) VCF file metadata

Moves connection

moves-storyline-data.json
(7.5 MB) Moves GPS maps, locations, and steps data.

Open Humans Healthkit Integration

healthkit-export_2014-12-01_2014-12-31_1469410459.49714.json
(3.7 KB) JSON dump of Healthkit Data
healthkit-export_2016-05-01_2016-05-31_1469410459.49714.json
(237.4 KB) JSON dump of Healthkit Data
healthkit-export_2016-06-01_2016-06-30_1469410459.49714.json
(473.1 KB) JSON dump of Healthkit Data
healthkit-export_2016-07-01_2016-07-24_1469410459.49714.json
(527.4 KB) JSON dump of Healthkit Data
healthkit-export_2016-07-24_2016-07-24_1469411510.97738.json
(3.8 KB) JSON dump of Healthkit Data

AncestryDNA Upload

AncestryDNA-genotyping.txt
(17.1 MB) AncestryDNA full genotyping data, original format
AncestryDNA-genotyping.vcf.bz2
(4.0 MB) AncestryDNA full genotyping data, VCF format

Harvard Personal Genome Project

PGP-Harvard-hu82436A-surveys.json
(11.1 KB) PGP Harvard survey data, JSON format.
PGP-Harvard-hu82436A-var.tsv.bz2
(225.9 MB) PGP Harvard genome, Complete Genomics var file format.
PGP-Harvard-hu82436A-var.vcf.bz2
(33.5 MB) PGP Harvard genome, VCF file. Derived from Complete Genomics var file.

openSNP

556.json
(103 bytes) links to openSNP user 556

23andMe Upload

23andMe-genotyping.txt
(24.4 MB) 23andMe full genotyping data, original format
23andMe-genotyping.vcf.bz2
(9.2 MB) 23andMe full genotyping data, VCF format