Joshua J. Berk (JoshuaJBerk)
Connected studies and activities

Open Humans Healthkit Integration GoViral (2014-2016) openSNP Keeping Pace Fitbit Connection Nokia Health (Withings) Connection 23andMe Upload OpenAPS Data Commons Circles Jawbone Connection Cross-Genome Error Check Data Selfies uBiome Upload Moves connection Runkeeper connection Harvard Personal Genome Project The Preference Project Public Data Sharing
About me

Entrepreneur and designer. Citizen scientist. Enthusiast for open-access science.

Please email me [ joshua.j.berk@gmail.com ] for further data/sample collection (or study participation).

Other health & activity data is (not yet) available via Apple Health (via Lifesum, Strava, etc.). Stay tuned!

Seeking sponsorship for WGS and participation in American Gut.

Public data

Harvard Personal Genome Project

PGP-Harvard-hu9EDB77-surveys.json
(6.7 KB) PGP Harvard survey data, JSON format.

uBiome Upload

taxonomy.json
(35.6 KB) uBiome 16S taxonomy data, JSON format.
uBiome-fastq.zip
(69.1 MB) uBiome 16S FASTQ raw sequencing data.

Data Selfies

Apple Health Export (June 2016).zip
(6.5 MB)
BodyView (BodyMetrics).pdf
(307.5 KB)
DirectLabs Results.pdf
(106.0 KB)
Vaccinations.pdf
(46.9 KB)

23andMe Upload

23andMe-genotyping.txt
(23.6 MB) 23andMe full genotyping data, original format
23andMe-genotyping.vcf.bz2
(9.0 MB) 23andMe full genotyping data, VCF format