Joshua J. Berk (JoshuaJBerk)
Connected studies and activities

Fitbit Harvard Personal Genome Project Jawbone Moves RunKeeper Withings The Preference Project 23andMe Upload Data Selfies Keeping Pace GoViral (2014-2016) Open Humans Healthkit Integration Cross-Genome Error Check Circles OpenAPS Data Commons openSNP uBiome Upload Public Data Sharing
About me

Entrepreneur and designer. Citizen scientist. Enthusiast for open-access science.

Please email me [ joshua.j.berk@gmail.com ] for further data/sample collection (or study participation).

Other health & activity data is (not yet) available via Apple Health (via Lifesum, Strava, etc.). Stay tuned!

Seeking sponsorship for WGS and participation in American Gut.

Public data

Data Selfies

Apple Health Export (June 2016).zip
(6.5 MB)
BodyView (BodyMetrics).pdf
(307.5 KB)
DirectLabs Results.pdf
(106.0 KB)
Vaccinations.pdf
(46.9 KB)

uBiome Upload

taxonomy.json
(35.6 KB) uBiome 16S taxonomy data, JSON format.
uBiome-fastq.zip
(69.1 MB) uBiome 16S FASTQ raw sequencing data.

23andMe Upload

23andMe-genotyping.txt
(23.6 MB) 23andMe full genotyping data, original format
23andMe-genotyping.vcf.bz2
(9.0 MB) 23andMe full genotyping data, VCF format

Harvard Personal Genome Project

PGP-Harvard-hu9EDB77-surveys.json
(6.7 KB) PGP Harvard survey data, JSON format.