Joshua J. Berk (JoshuaJBerk)
Connected studies and activities

openSNP Harvard Personal Genome Project Runkeeper connection Data Selfies uBiome Upload Moves connection Nokia Health (Withings) Connection GoViral (2014-2016) The Preference Project Circles Cross-Genome Error Check Keeping Pace 23andMe Upload Jawbone Connection Fitbit Connection Open Humans Healthkit Integration Public Data Sharing
About me

Entrepreneur and designer. Citizen scientist. Enthusiast for open-access science.

Please email me [ joshua.j.berk@gmail.com ] for further data/sample collection (or study participation).

Other health & activity data is (not yet) available via Apple Health (via Lifesum, Strava, etc.). Stay tuned!

Seeking sponsorship for WGS and participation in American Gut.

Public data

uBiome Upload

taxonomy.json
(35.6 KB) uBiome 16S taxonomy data, JSON format.
uBiome-fastq.zip
(69.1 MB) uBiome 16S FASTQ raw sequencing data.

Data Selfies

Apple Health Export (June 2016).zip
(6.5 MB)
BodyView (BodyMetrics).pdf
(307.5 KB)
DirectLabs Results.pdf
(106.0 KB)
Vaccinations.pdf
(46.9 KB)

23andMe Upload

23andMe-genotyping.txt
(23.6 MB) 23andMe full genotyping data, original format
23andMe-genotyping.vcf.bz2
(9.0 MB) 23andMe full genotyping data, VCF format

Harvard Personal Genome Project

PGP-Harvard-hu9EDB77-surveys.json
(6.7 KB) PGP Harvard survey data, JSON format.