Alana Lynch (ambagesia)
Connected studies and activities

Harvard Personal Genome Project American Gut Project GoViral (2014-2016) 23andMe Upload Personal Data Notebooks Cross-Genome Error Check The Preference Project Public Data Sharing
About me

Linguistics + computation nerd.

Public data

American Gut Project

American-Gut-SAMEA3612207-ena-info.json
(2.3 KB) American Gut sample accession data from the European Nucleotide Archive, JSON format.
American-Gut-SAMEA3612207-ena-info.tsv
(1.8 KB) American Gut sample accession data from the European Nucleotide Archive, TSV format.
American-Gut-SAMEA3612207-metadata.json
(15.4 KB) American Gut sample survey data and metadata, JSON format.
American-Gut-SAMEA3612207-metadata.tsv
(11.6 KB) American Gut sample survey data and metadata, TSV format.
American-Gut-SAMEA3612207-run-ERR1076740.fastq.gz
(2.1 MB) American Gut 16S FASTQ raw sequencing data.
American-Gut-SAMEA3612208-ena-info.json
(2.3 KB) American Gut sample accession data from the European Nucleotide Archive, JSON format.
American-Gut-SAMEA3612208-ena-info.tsv
(1.8 KB) American Gut sample accession data from the European Nucleotide Archive, TSV format.
American-Gut-SAMEA3612208-metadata.json
(15.4 KB) American Gut sample survey data and metadata, JSON format.
American-Gut-SAMEA3612208-metadata.tsv
(11.6 KB) American Gut sample survey data and metadata, TSV format.
American-Gut-SAMEA3612208-run-ERR1076741.fastq.gz
(3.1 MB) American Gut 16S FASTQ raw sequencing data.
American-Gut-SAMEA3612209-ena-info.json
(2.3 KB) American Gut sample accession data from the European Nucleotide Archive, JSON format.
American-Gut-SAMEA3612209-ena-info.tsv
(1.8 KB) American Gut sample accession data from the European Nucleotide Archive, TSV format.
American-Gut-SAMEA3612209-metadata.json
(15.4 KB) American Gut sample survey data and metadata, JSON format.
American-Gut-SAMEA3612209-metadata.tsv
(11.6 KB) American Gut sample survey data and metadata, TSV format.
American-Gut-SAMEA3612209-run-ERR1076742.fastq.gz
(4.3 MB) American Gut 16S FASTQ raw sequencing data.
American-Gut-SAMEA3612210-ena-info.json
(2.3 KB) American Gut sample accession data from the European Nucleotide Archive, JSON format.
American-Gut-SAMEA3612210-ena-info.tsv
(1.8 KB) American Gut sample accession data from the European Nucleotide Archive, TSV format.
American-Gut-SAMEA3612210-metadata.json
(15.4 KB) American Gut sample survey data and metadata, JSON format.
American-Gut-SAMEA3612210-metadata.tsv
(11.6 KB) American Gut sample survey data and metadata, TSV format.
American-Gut-SAMEA3612210-run-ERR1076743.fastq.gz
(3.9 MB) American Gut 16S FASTQ raw sequencing data.
American-Gut-SAMEA3613057-ena-info.json
(2.3 KB) American Gut sample accession data from the European Nucleotide Archive, JSON format.
American-Gut-SAMEA3613057-ena-info.tsv
(1.8 KB) American Gut sample accession data from the European Nucleotide Archive, TSV format.
American-Gut-SAMEA3613057-metadata.json
(15.4 KB) American Gut sample survey data and metadata, JSON format.
American-Gut-SAMEA3613057-metadata.tsv
(11.6 KB) American Gut sample survey data and metadata, TSV format.
American-Gut-SAMEA3613057-run-ERR1077628.fastq.gz
(505.5 KB) American Gut 16S FASTQ raw sequencing data.

Harvard Personal Genome Project

PGP-Harvard-hu1DD730-surveys.json
(6.6 KB) PGP Harvard survey data, JSON format.
PGP-Harvard-hu1DD730-var.tsv.bz2
(276.7 MB) PGP Harvard genome, Complete Genomics var file format.
PGP-Harvard-hu1DD730-var.vcf.bz2
(33.1 MB) PGP Harvard genome, VCF file. Derived from Complete Genomics var file.

23andMe Upload

23andMe-genotyping.txt
(23.6 MB) 23andMe full genotyping data, original format
23andMe-genotyping.vcf.bz2
(8.7 MB) 23andMe full genotyping data, VCF format